An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Blast in NONCODE
Choose program to use and database to search:

Program Database

Set subsequence: From     To  

The query sequence is filtered for low complexity regions by default.
Filter Low complexity Mask for lookup table only

Expect    Matrix Perform ungapped alignment

Query Genetic Codes (blastx only)

Database Genetic Codes (tblast[nx] only)

Frame shift penalty for blastx

Other advanced options:     

Graphical Overview    Alignment view
Descriptions    Alignments Color schema

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Last modified: Jan 11, 2002